H1-B Lottery for mutiple applications 2021

I am planning to apply for H1-B this year from 2 different employers with 2 different jobs. I wanted to know how the H1-B lottery is run for 2 different applications. I have done Masters in USA and eligible for Masters Cap. In case, if 1 of the applications is picked in the General Lottery and the other application is not picked. After the General Lottery is run, they will removed all the applications which are picked in the General Lottery. In this scenario, will they even remove my other application which was not picked when the run the Masters Lottery since its an application from the same Beneficiary?